The demographics file contains the weights. Take a peek at its contents and return with questions. Note that the DOC file containing an overview of the file is right there. Right click on the XPT data file and copy the URL. Scroll down, click on data of interest (e.g., demographics). dta files and consider adjusting the weights.įinally, if you are interested in using Frames functionality to “merge” a dataset (aka skip saving multiple dta files in the process of building an analytica dataset), then check out this post. do script that would be straightforward to include below.Īlso, if you are trying to combine analyses from multiple NHANES cycles (say, combinine 2009-2010 with 2011-2012), things get a bit more complicated. The NHANES-NDI linkage website provides an example Stata. This also won’t merge with the National Death Index files, which are hosted elsewhere. reshape wide rxddrug rxddrgid rxqseen rxddays, i(seqn) j(j) You’ll need to use the reshape wide command on those variables before merging. For example, the Prescription Medications – Drug Information questionnaire has a row for each medication and ICD code its use for all participants. You won’t be able to merge files with multiple entries per users. do file’s parent folder to be Stata’s working directory. do file from Windows Explorer with Stata closed sets the. do file through Explorer, and then run! Opening the. Set the working directory to be in the same folder as your. Just copy/paste the code below and save into a. In this example, we’ll look at the 2009-2010 NHANES results and apply weighting to estimate the amount of the US population who have been told that they have high blood pressure. Import the NHANES SAS XPT files directly from the CDC website with just the XPT file’s URL, 2. In this short script, you’ll see how to 1. If you tried to download the FOLATE_G file, CDC’s website will give their version of a 404 error and Stata will stop the. For example, the 2011-2012 Folate lab results were withdrawn February 2018. If the source data files are removed for inaccuracies, the file won’t run and you’ll be prompted to investigate. do file, it’ll grab the freshest data files available. If the source files are updated by the CDC, no worry! Every time you run this. This means that you don’t have to worry about maintaining your personal database of NHANES files. do file below shows you how easy it is to download just the needed files on the fly then do some simple analyses. I love that Stata will download datasets for you with just a URL. Leverage Stata’s internet connectivity to make NHANES analyses easy Re-downloading all of the many files every time you want to do a project is a big headache. (I strongly recommend subscribing the the NHANES Listserv to get real-time updates.) If you have NHANES files saved locally from 2-3 years ago, there’s a reasonable chance that you are using outdated databases, which could yield some false conclusions. Files may be updated for errors or removed entirely without you knowing about it. To make this data management task slightly more complex, the CDC sporadically publishes interval updates of the source data files on their website. Plus, all of the files are in SAS XPT format so you have to download, import, save, and merge before you can even think about starting an analysis. Manipulating NHANES data is challenging for beginners because of the sheer quantity of individual files and requirement for weighting. The best part? You can download almost all of NHANES data from the CDC website right now for free. Manuscripts using NHANES data have been published across the spectrum of medical journals, all the way up to NEJM. A few of these years are linked to National Death Index data, so you can assess risk factors at the time of the survey and use time-to-event mortality data to identify novel risk factors for death. For the past ~18 years it sampled different communities across the US in 2 year continuous cycles. NHANES is a robust, nationally-representative cross-sectional study.
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